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Select Database:
Ensembl
NCBI
Enter Ensembl Gene IDs below:
Load a list of 10 Random genes
Clear Input
*
It will take few minutes to automatically fetch data from Ensembl.( Only valid matching id's data will be processed.)
Analyse a sequence by NCBI Accession Id:
Load Example
Note:
*
It will take few minutes to automatically fetch data from NCBI.
Do you want to search for CpG Islands?:
No
Yes
Which CPG Model:
Non-Overlapping
Overlapping
Choose Model:
Choose model for motif search:
Non-Overlapping model
Overlapping model
Configure Quadreplexes or Motif parameters:
Nucleobase to search:
G
C
A
T
Min. Stem size:
2
3
Max. Stem size:
4
5
Min. loop length
1
2
3
4
5
6
7
8
9
10
Max. loop length
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
Select strand(s) to search motifs:
'+' strand
'-' strand
Both strands
Do you want to search for atypical motifs?
Bulges:
0
1
2
3
4
5
Mismatches:
0
1
2
Submit
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